load matfile in python using scipy.io and pandas dataframe in python, how to solve error:valueerror: per-column arrays must each be 1-dimensional in python

To load a MATLAB .mat file in Python using scipy.io and convert it to a Pandas DataFrame, you can follow these steps:

  1. Import the required libraries:
main.py
import scipy.io
import pandas as pd
36 chars
3 lines
  1. Load the .mat file using scipy.io.loadmat() function:
main.py
data = scipy.io.loadmat('your_file.mat')
41 chars
2 lines
  1. Extract the variables from the loaded .mat file using their respective keys:
main.py
variable_1 = data['variable_name_1']
variable_2 = data['variable_name_2']
# Repeat this for each variable you want to extract
126 chars
4 lines
  1. Ensure that each variable extracted is 1-dimensional using ndim attribute:
main.py
if variable_1.ndim > 1:
    variable_1 = variable_1.flatten()
# Repeat this for each variable
94 chars
4 lines
  1. Create a Pandas DataFrame with the extracted variables:
main.py
df = pd.DataFrame({
    'variable_1': variable_1,
    'variable_2': variable_2,
    # Add more columns if necessary
})
119 chars
6 lines

You can then work with the df DataFrame as per your requirements.

If you encounter a ValueError: per-column arrays must each be 1-dimensional error, it means that one of the extracted variables is not 1-dimensional. Make sure to use the flatten() method to convert any multi-dimensional arrays to 1-dimensional before creating the DataFrame.

related categories

gistlibby LogSnag