manual pixel selection for grow cut segmentation then autosegment based on pixel intensity values within 100 then apply to subsequent slices in matlab

To manually select pixels for grow-cut segmentation, you can use the roipoly function in Matlab. This allows you to select a region of interest (ROI) by manually clicking on the pixels you want to include in the ROI.

main.m
% Load image
img = imread('my_image.png');

% Display image and allow user to select ROI
roi = roipoly(img);

% Perform grow-cut segmentation based on pixel intensity values within 100 of ROI
bw = imdilate(roi, strel('disk', 5));
bw = growcut(img, bw, 100);

% Apply segmentation to subsequent slices
for i = 2:num_slices
    img = imread(['my_image_', num2str(i), '.png']);
    bw = imdilate(bw, strel('disk', 5));
    bw = growcut(img, bw, 100);
    % do something with the segmented image
end
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In the code above, img is the input image and num_slices is the total number of slices to apply the segmentation to. The ischanged function can also be used to check if the ROI has been modified between slices, and if so, update the bw mask before applying the segmentation to the current slice.

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